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PDB code 5C8Y

Compile Data Set for Download or QSAR

Identical Ligands in BindingDB

Found 5 hits Enzyme Inhibition Constant Data   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Tubulin beta chain

  (439/445 = 99%)
(Sus scrofa)
BDBM50030765
PNG
(NPI-2358 | PLINABULIN | Plinabulin)
Show SMILES CC(C)(C)c1[nH]cnc1\C=c1/[nH]c(=O)\c(=C\c2ccccc2)[nH]c1=O
Show InChI InChI=1S/C19H20N4O2/c1-19(2,3)16-13(20-11-21-16)10-15-18(25)22-14(17(24)23-15)9-12-7-5-4-6-8-12/h4-11H,1-3H3,(H,20,21)(H,22,25)(H,23,24)/b14-9-,15-10-
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n/an/a 1.80E+3n/an/an/an/an/an/a



Tokyo University of Pharmacy and Life Sciences

Curated by ChEMBL


Assay Description
Inhibition of porcine tubulin polymerization by spectrophotometry


ACS Med Chem Lett 5: 1094-8 (2014)


Article DOI: 10.1021/ml5001883
BindingDB Entry DOI: 10.7270/Q2R49SCP
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Tubulin beta chain

  (439/445 = 99%)
(Sus scrofa)
BDBM50030765
PNG
(NPI-2358 | PLINABULIN | Plinabulin)
Show SMILES CC(C)(C)c1[nH]cnc1\C=c1/[nH]c(=O)\c(=C\c2ccccc2)[nH]c1=O
Show InChI InChI=1S/C19H20N4O2/c1-19(2,3)16-13(20-11-21-16)10-15-18(25)22-14(17(24)23-15)9-12-7-5-4-6-8-12/h4-11H,1-3H3,(H,20,21)(H,22,25)(H,23,24)/b14-9-,15-10-
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n/an/an/a 1.06E+3n/an/an/an/an/a



Tokyo University of Pharmacy and Life Sciences

Curated by ChEMBL


Assay Description
Binding affinity to porcine tubulin after 1 hr by spectrofluorometric analysis


J Med Chem 55: 1056-71 (2012)


Article DOI: 10.1021/jm2009088
BindingDB Entry DOI: 10.7270/Q20R9S8Q
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Tubulin beta chain

  (439/445 = 99%)
(Sus scrofa)
BDBM50030765
PNG
(NPI-2358 | PLINABULIN | Plinabulin)
Show SMILES CC(C)(C)c1[nH]cnc1\C=c1/[nH]c(=O)\c(=C\c2ccccc2)[nH]c1=O
Show InChI InChI=1S/C19H20N4O2/c1-19(2,3)16-13(20-11-21-16)10-15-18(25)22-14(17(24)23-15)9-12-7-5-4-6-8-12/h4-11H,1-3H3,(H,20,21)(H,22,25)(H,23,24)/b14-9-,15-10-
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n/an/an/a 1.06E+3n/an/an/an/an/a



Tokyo University of Pharmacy and Life Sciences

Curated by ChEMBL


Assay Description
Binding affinity to pig tubulin after 1 hr by fluorescence quenching analysis


Bioorg Med Chem 18: 3169-74 (2010)


Article DOI: 10.1016/j.bmc.2010.03.037
BindingDB Entry DOI: 10.7270/Q2QR50Z5
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Tubulin

  (439/445 = 99%)
(Sus scrofa (Pig))
BDBM50030765
PNG
(NPI-2358 | PLINABULIN | Plinabulin)
Show SMILES CC(C)(C)c1[nH]cnc1\C=c1/[nH]c(=O)\c(=C\c2ccccc2)[nH]c1=O
Show InChI InChI=1S/C19H20N4O2/c1-19(2,3)16-13(20-11-21-16)10-15-18(25)22-14(17(24)23-15)9-12-7-5-4-6-8-12/h4-11H,1-3H3,(H,20,21)(H,22,25)(H,23,24)/b14-9-,15-10-
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n/an/an/a 1.00E+3n/an/an/an/an/a



Tokyo University of Pharmacy and Life Sciences

Curated by ChEMBL


Assay Description
Binding affinity to porcine tubulin incubated for 1 hr by spectrofluorometry


ACS Med Chem Lett 5: 1094-8 (2014)


Article DOI: 10.1021/ml5001883
BindingDB Entry DOI: 10.7270/Q2R49SCP
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Tubulin beta chain

  (439/445 = 99%)
(Sus scrofa)
BDBM50030765
PNG
(NPI-2358 | PLINABULIN | Plinabulin)
Show SMILES CC(C)(C)c1[nH]cnc1\C=c1/[nH]c(=O)\c(=C\c2ccccc2)[nH]c1=O
Show InChI InChI=1S/C19H20N4O2/c1-19(2,3)16-13(20-11-21-16)10-15-18(25)22-14(17(24)23-15)9-12-7-5-4-6-8-12/h4-11H,1-3H3,(H,20,21)(H,22,25)(H,23,24)/b14-9-,15-10-
PDB

UniProtKB/SwissProt

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PC cid
PC sid
PDB
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Article
PubMed
n/an/an/a 1.06E+3n/an/an/an/an/a



Tokyo University of Pharmacy and Life Sciences

Curated by ChEMBL


Assay Description
Binding affinity to porcine tubulin after 1 hr by spectrofluorometric analysis


Bioorg Med Chem 19: 595-602 (2011)


Article DOI: 10.1016/j.bmc.2010.10.055
BindingDB Entry DOI: 10.7270/Q2WS8X2Q
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)

Search BindingMOAD for More Affinity Data:

* indicates data uncertainty>20%
* 0.9 Tanimoto similarity
Identities from BLAST output