Novel dabigatran derivatives with a fluorine atom at the C-2 position of the terminal benzene ring: Design, synthesis and anticoagulant activity evaluation

Eur J Med Chem. 2017 Jan 27:126:799-809. doi: 10.1016/j.ejmech.2016.12.015. Epub 2016 Dec 8.

Abstract

This manuscript describes the preparation of dabigatran derivatives and their inhibitory potentials toward human thrombin. Among the tested compounds, 7c, 7k, 7m and 7o, with IC50 values of 1.54, 0.84, 1.18 and 1.42 nM, exhibited comparable inhibitory activity to dabigatran (IC50 = 1.20 nM). The in vivo anti-thrombotic activity of compounds 7c and 7o in SD rats was studied. Results showed that intravenously administering the two compounds significantly inhibited the growth of thrombus with an inhibition rate of (84.24 ± 1.53)% and (84.57 ± 0.45)%, which were comparable to that of dabigatran (85.07 ± 0.61)%. Furthermore, the docking simulation of active compounds (7k and 7m) provided a potential binding model. Results indicated that these compounds could be further investigated to determine their anticoagulant activities.

Keywords: Anticoagulant activity; Fluorinated dabigatran derivatives; Molecular docking; Synthesis.

MeSH terms

  • Animals
  • Antithrombins / chemical synthesis*
  • Antithrombins / chemistry
  • Antithrombins / metabolism
  • Antithrombins / pharmacology*
  • Benzene / chemistry*
  • Chemistry Techniques, Synthetic
  • Dabigatran / chemical synthesis*
  • Dabigatran / chemistry
  • Dabigatran / metabolism
  • Dabigatran / pharmacology*
  • Drug Design*
  • Fluorine / chemistry*
  • Humans
  • Molecular Docking Simulation
  • Protein Conformation
  • Rats
  • Rats, Sprague-Dawley
  • Thrombin / antagonists & inhibitors
  • Thrombin / chemistry
  • Thrombin / metabolism

Substances

  • Antithrombins
  • Fluorine
  • Thrombin
  • Dabigatran
  • Benzene