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Target
Orotidine 5'-phosphate decarboxylase
Ligand
BDBM21340
Substrate
BDBM21336
Meas. Tech.
Enzyme Inhibition Assay
pH
7.5±n/a
Temperature
328.15±n/a K
Ki
12400±0.7 nM
Citation
 Bello, AM; Poduch, E; Liu, Y; Wei, L; Crandall, I; Wang, X; Dyanand, C; Kain, KC; Pai, EF; Kotra, LP Structure-activity relationships of C6-uridine derivatives targeting plasmodia orotidine monophosphate decarboxylase. J Med Chem 51:439-48 (2008) [PubMed]  Article 
Target
Name:
Orotidine 5'-phosphate decarboxylase
Synonyms:
OMP decarboxylase | OMPDCase | Orotidine 5-phosphate decarboxylase | Orotidine Monophosphate Decarboxylase (ODCase) | PYRF_METTH | pyrF
Type:
Enzyme
Mol. Mass.:
24909.45
Organism:
Methanobacterium thermoautotrophicum
Description:
n/a
Residue:
228
Sequence:
MRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFRGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP
  
Inhibitor
Name:
BDBM21340
Synonyms:
6-aza-UMP | C6-Uridine Derivative, 18 | {[(2R,3S,4R,5R)-5-(3,5-dioxo-2,3,4,5-tetrahydro-1,2,4-triazin-2-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}phosphonic acid
Type:
Small organic molecule
Emp. Form.:
C8H12N3O9P
Mol. Mass.:
325.1693
SMILES:
O[C@@H]1[C@@H](COP(O)(O)=O)O[C@H]([C@@H]1O)n1ncc(=O)[nH]c1=O |r|
Structure:
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Substrate
Name:
BDBM21336
Synonyms:
3-[(2R,3R,4S,5R)-3,4-dihydroxy-5-[(phosphonooxy)methyl]oxolan-2-yl]-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid | OMP | orotidine 5-monophosphate | orotidylic acid
Type:
Nucleoside or nucleotide
Emp. Form.:
C10H13N2O11P
Mol. Mass.:
368.1908
SMILES:
O[C@@H]1[C@@H](COP(O)(O)=O)O[C@H]([C@@H]1O)n1c(cc(=O)[nH]c1=O)C(O)=O |r|
Structure:
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