Discovery of novel inhibitors of LEDGF/p75-IN protein-protein interactions

Bioorg Med Chem. 2013 Feb 15;21(4):957-63. doi: 10.1016/j.bmc.2012.12.012. Epub 2012 Dec 20.

Abstract

Human lens epithelium-derived growth factor (LEDGF)/p75 plays an important role in the HIV life cycle by stimulating integrase (IN)-led viral DNA integration into cellular chromosomes. Mechanistic studies show the majority of IN inhibitors chelate magnesium ions in the catalytic active site, a region topologically distant from the LEDGF/p75 binding site. Compounds disrupting the formation of LEDGF/p75 and IN complexes serve as a novel mechanistic approach different from current antiretroviral therapies. We previously built pharmacophore models mimicking LEDGF/p75 residues and identified four classes of LEDGF/p75-IN inhibitors. Substructure and similarity searches yielded additional LEDGF/p75-IN inhibitors containing an acylhydrazone moiety. The most potent of the acylhydrazones inhibited LEDGF/p75-IN interaction with an IC(50) value of 400nM. We explored structure-activity relationships (SAR) and identified new acylhydrazones, hydrazines, and diazenes as lead molecules for further optimization. Two lead LEDGF/p75-IN inhibitors showed antiviral activity.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Binding Sites
  • Cell Line
  • Cell Proliferation / drug effects
  • Drug Evaluation, Preclinical
  • HIV Integrase / chemistry
  • HIV Integrase / genetics
  • HIV Integrase / metabolism
  • HIV Integrase Inhibitors / chemical synthesis
  • HIV Integrase Inhibitors / chemistry*
  • HIV Integrase Inhibitors / pharmacology
  • Humans
  • Hydrazines / chemistry
  • Hydrazones / chemistry
  • Imides / chemistry
  • Intercellular Signaling Peptides and Proteins / chemistry*
  • Molecular Docking Simulation
  • Peptides / chemical synthesis
  • Peptides / chemistry*
  • Peptides / pharmacology
  • Protein Interaction Maps / drug effects
  • Protein Structure, Tertiary
  • Recombinant Proteins / biosynthesis
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Structure-Activity Relationship

Substances

  • HIV Integrase Inhibitors
  • Hydrazines
  • Hydrazones
  • Imides
  • Intercellular Signaling Peptides and Proteins
  • Peptides
  • Recombinant Proteins
  • lens epithelium-derived growth factor
  • hydrazine
  • HIV Integrase
  • diazene