Target
Dimer of Gag-Pol polyprotein [489-587]
Ligand
BDBM898
Substrate
Peptide substrate
Meas. Tech.
Protease Inhibition Assay
pH
5.5±n/a
Temperature
303.15±n/a K
Comments
No inhibition to HIV-1 protease
Citation
 Smith, ABHirschmann, RPasternak, AAkaishi, RGuzman, MCJones, DRKeenan, TPSprengeler, PADarke, PLEmini, EA Design and synthesis of peptidomimetic inhibitors of HIV-1 protease and renin. Evidence for improved transport. J Med Chem 37:215-8 (1994) [PubMed]  Article 
Target
Name:
Dimer of Gag-Pol polyprotein [489-587]
Synonyms:
HIV-1 Protease
Type:
Protein Complex
Mol. Mass.:
n/a
Description:
n/a
Components:
This complex has 2 components.
Component 1
Name:
Gag-Pol polyprotein [489-587]
Synonyms:
HIV protease | HIV-1 Protease (NY5-type sequence) | HIV-1 Protease chain A | HIV-1 Protease chain B | POL_HV1N5 | gag-pol
Type:
Enzyme Subunit
Mol. Mass.:
10822.21
Organism:
Human immunodeficiency virus type 1
Description:
P12497[489-587]
Residue:
99
Sequence:
PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF
  
Component 2
Name:
Gag-Pol polyprotein [489-587]
Synonyms:
HIV protease | HIV-1 Protease (NY5-type sequence) | HIV-1 Protease chain A | HIV-1 Protease chain B | POL_HV1N5 | gag-pol
Type:
Enzyme Subunit
Mol. Mass.:
10822.21
Organism:
Human immunodeficiency virus type 1
Description:
P12497[489-587]
Residue:
99
Sequence:
PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF
  
Inhibitor
Name:
BDBM898
Synonyms:
(2S)-2-benzyl-4-[(2S)-4-[(2R,3R,4S)-1-cyclohexyl-3,4-dihydroxy-6-methylheptan-2-yl]-2-(2-methylpropyl)-3-oxo-2,3-dihydro-1H-pyrrol-2-yl]-2-[2-(morpholin-4-yl)-2-oxoethyl]-2,3-dihydro-1H-pyrrol-3-one | Peptidomimetic inhibitor 2
Type:
Small organic molecule
Emp. Form.:
C39H57N3O6
Mol. Mass.:
663.8864
SMILES:
CC(C)C[C@H](O)[C@H](O)[C@H](CC1CCCCC1)C1C=N[C@@](CC(C)C)(C2C=N[C@](CC(=O)N3CCOCC3)(Cc3ccccc3)C2=O)C1=O |r,c:18,26|
Structure:
Search PDB for entries with ligand similarity:
Substrate
Name:
Peptide substrate
Synonyms:
n/a
Type:
Peptide
Mol. Mass.:
4618.57
Organism:
n/a
Description:
n/a
Residue:
43
Sequence:
NHVALSERGLNASNETANAPTHYLALANINEPRVALILEGLNH