Potent inhibition of influenza sialidase by a benzoic acid containing a 2-pyrrolidinone substituent

J Med Chem. 1999 Jul 1;42(13):2332-43. doi: 10.1021/jm980707k.

Abstract

On the basis of the lead compound 4-(N-acetylamino)-3-guanidinobenzoic acid (BANA 113), which inhibits influenza A sialidase with a Ki of 2.5 microM, several novel aromatic inhibitors of influenza sialidases were designed. In this study the N-acetyl group of BANA 113 was replaced with a 2-pyrrolidinone ring, which was designed in part to offer opportunities for introduction of spatially directed side chains that could potentially interact with the 4-, 5-, and/or 6-subsites of sialidase. While the parent structure 1-(4-carboxy-2-guanidinophenyl)pyrrolidin-2-one (8) was only a modest inhibitor of sialidase, the introduction of a hydroxymethyl or bis(hydroxymethyl) substituent at the C5' position of the 2-pyrrolidinone ring resulted in inhibitors (9 and 12, respectively) with low micromolar activity. Crystal structures of these inhibitors in complex with sialidase demonstrated that the substituents at the 5'-position of the 2-pyrrolidinone ring interact in the 4- and/or 5-subsites of the enzyme. Replacement of the guanidine in 12 with a hydrophobic 3-pentylamino group resulted in a large enhancement in binding to produce an inhibitor (14) with an IC50 of about 50 nM against influenza A sialidase, although the inhibition of influenza B sialidase was 2000-fold less. This represents the first reported example of a simple, achiral benzoic acid with potent (low nanomolar) activity as an inhibitor of influenza sialidase.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Benzoates / chemical synthesis*
  • Benzoates / chemistry
  • Crystallography, X-Ray
  • Enzyme Inhibitors / chemical synthesis*
  • Enzyme Inhibitors / chemistry
  • Influenza A virus / chemistry
  • Influenza B virus / chemistry
  • Models, Molecular
  • Neuraminidase / antagonists & inhibitors*
  • Neuraminidase / isolation & purification
  • Pyrrolidinones / chemical synthesis*
  • Pyrrolidinones / chemistry
  • Spectrometry, Fluorescence
  • Structure-Activity Relationship

Substances

  • Benzoates
  • Enzyme Inhibitors
  • Pyrrolidinones
  • Neuraminidase